PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN36233.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 251aa    MW: 28293.6 Da    PI: 9.7621
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN36233.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.6e-08154194954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  KHN36233.1 154 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 194
                 699*****************87.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.434145194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.0E-14146204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-14149204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.0E-14151200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.3E-6155194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.15E-6168199No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016787Molecular Functionhydrolase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MDVDKLKTST SDSSMDMMMM MMQMEKFPEF CEPFYNNNTT TTTTTTLLYP ENEYFLNSTT  60
TTLPVFPNVN NPNVITPPPT TLINPPPPSS NFVLQQPMTP HLEPNPEKKN SVAAMREMIF  120
RVAVMQPVHI DPESIKPPKR RNVKISKDPQ SVAARHRRER ISERIRILQR LVPGGTKMDT  180
ASMLDEAIHY VKFLKKQVQT LEQAGATRPL NVVGFPTTVS NANNNVNYSS FVKSCQPYPM  240
LGSSASKQLL S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0977110.0BT097711.1 Soybean clone JCVI-FLGm-22O4 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003517303.10.0PREDICTED: transcription factor HEC2
SwissprotQ9FHA75e-53HEC1_ARATH; Transcription factor HEC1
TrEMBLA0A0B2RUW70.0A0A0B2RUW7_GLYSO; Transcription factor HEC1
TrEMBLK7K4L80.0K7K4L8_SOYBN; Uncharacterized protein
STRINGGLYMA01G39360.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65134141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.13e-42bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]